Description

RAP1A, member of RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9855]

Synonyms

KREV-1, SMGP21

INSDC coordinates

chromosome:GRCh38:CM000663.2:111542218:111716691:1

About this gene

This gene has 4 transcripts (splice variants), 82 orthologues, 11 paralogues, is a member of 1 Ensembl protein family and is associated with 34 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
RAP1A-001ENST000003697095024184aaENSP00000358723
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS840A8KAH9 P62834 NM_001010935
NM_001291896
NM_002884
NP_001010935
NP_001278825
NP_002875
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

RAP1A-002ENST000003564151586184aaENSP00000348786
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS840A8KAH9 P62834 -TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

RAP1A-003ENST00000433097666129aaENSP00000396741
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A075B6Q0 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

RAP1A-004ENST000004949821083No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays