Description

butyrophilin, subfamily 2, member A1 [Source:HGNC Symbol;Acc:HGNC:1136]

Synonyms

BT2.1, BTF1, BTN2.1

Location
INSDC coordinates

chromosome:GRCh38:CM000668.2:26457904:26476621:1

About this gene

This gene has 7 transcripts (splice variants), 153 orthologues, 11 paralogues, is a member of 2 Ensembl protein families and is associated with 92 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
BTN2A1-003ENST000004293813113334aaENSP00000416945
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS47390Q7KYR7 NM_078476
NP_510961
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species
Glossary entry for APPRIS
APPRIS website
BTN2A1-001ENST000003125412920527aaENSP00000312158
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS4613Q7KYR7 NM_007049
NP_008980
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI3APPRIS candidate principal isoform (earliest CCDS)
Glossary entry for APPRIS
APPRIS website
BTN2A1-201ENST000005415222845466aaENSP00000443909
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS56405Q7KYR7 NM_001197233
NP_001184162
TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
BTN2A1-004ENST000004691851687330aaENSP00000419043
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS56404Q7KYR7 NM_001197234
NP_001184163
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species
Glossary entry for APPRIS
APPRIS website
BTN2A1-007ENST0000048021868778aaENSP00000418936
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H7C542 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

BTN2A1-006ENST0000049317355186aaENSP00000420447
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C9JNC3 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

BTN2A1-002ENST000003776002989151aaENSP00000366825
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-H7BYC3 -TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays