Description

protein tyrosine phosphatase, non-receptor type 6 [Source:HGNC Symbol;Acc:HGNC:9658]

Synonyms

HCP, HCPH, PTP-1C, SHP-1, SHP1

Location

Chromosome 12: 6,946,468-6,961,316 forward strand.

GRCh38:CM000674.2

About this gene

This gene has 23 transcripts (splice variants), 63 orthologues, 14 paralogues, is a member of 5 Ensembl protein families and is associated with 74 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
PTPN6-201ENST000004560132389624aaENSP00000391592
 
Protein coding
CCDS44821P29350 NM_080549
NP_536859
TSL:1GENCODE basic
PTPN6-008ENST000003189742245595aaENSP00000326010
 
Protein coding
CCDS44820P29350 NM_002831
NP_002822
TSL:1GENCODE basicAPPRIS ALT1
PTPN6-001ENST000003994482159597aaENSP00000382376
 
Protein coding
CCDS41744P29350 Q53XS4 NM_080548
NP_536858
TSL:1GENCODE basicAPPRIS P3
PTPN6-018ENST00000543115650130aaENSP00000443393
 
Protein coding
-F5H5H9 -CDS 3' incompleteTSL:4
PTPN6-023ENST00000541698592151aaENSP00000445646
 
Protein coding
-F5H1Z8 -CDS 3' incompleteTSL:4
PTPN6-014ENST00000538715579165aaENSP00000438740
 
Protein coding
-F5H0N8 -CDS 3' incompleteTSL:4
PTPN6-021ENST00000542462570144aaENSP00000440114
 
Protein coding
-F5GY79 -CDS 3' incompleteTSL:4
PTPN6-012ENST0000054515395972aaENSP00000476175
 
Nonsense mediated decay
-U3KQS1 -TSL:3
PTPN6-019ENST0000054284865658aaENSP00000444805
 
Nonsense mediated decay
-F5H4Z1 -TSL:5
PTPN6-013ENST0000053601360256aaENSP00000446345
 
Nonsense mediated decay
-F5H1V7 -TSL:5
PTPN6-016ENST0000053546254360aaENSP00000441044
 
Nonsense mediated decay
-F5GXD4 -TSL:4
PTPN6-004ENST00000539029705No protein-
 
Processed transcript
---TSL:3
PTPN6-005ENST00000537533673No protein-
 
Processed transcript
---TSL:3
PTPN6-007ENST00000542277664No protein-
 
Processed transcript
---TSL:3
PTPN6-011ENST00000540740592No protein-
 
Processed transcript
---TSL:4
PTPN6-010ENST00000543120564No protein-
 
Processed transcript
---TSL:4
PTPN6-025ENST00000534900538No protein-
 
Processed transcript
---TSL:4
PTPN6-003ENST000004162152412No protein-
 
Retained intron
---TSL:2
PTPN6-002ENST000005437442043No protein-
 
Retained intron
---TSL:1
PTPN6-022ENST00000539365907No protein-
 
Retained intron
---TSL:5
PTPN6-006ENST00000542761795No protein-
 
Retained intron
---TSL:2
PTPN6-024ENST00000538318759No protein-
 
Retained intron
---TSL:5
PTPN6-015ENST00000536521513No protein-
 
Retained intron
---TSL:2

Gene-based displays