Description

protein tyrosine phosphatase, non-receptor type 6 [Source:HGNC Symbol;Acc:HGNC:9658]

Synonyms

HCP, HCPH, PTP-1C, SHP-1, SHP1

Location
INSDC coordinates

chromosome:GRCh38:CM000674.2:6946468:6961316:1

Transcripts

This gene has 23 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
PTPN6-201ENST000004560132389 bp624 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS44821F5H0N8 P29350 NM_080549
NP_536859
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
PTPN6-008ENST000003189742245 bp595 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS44820F5H0N8 P29350 NM_002831
NP_002822
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
PTPN6-001ENST000003994482159 bp597 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS41744P29350 Q53XS4 NM_080548
NP_536858
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
PTPN6-018ENST00000543115650 bp130 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F5H5H9 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
PTPN6-023ENST00000541698592 bp151 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F5H1Z8 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
PTPN6-014ENST00000538715579 bp165 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F5H0N8 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
PTPN6-021ENST00000542462570 bp144 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F5GY79 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
PTPN6-012ENST00000545153959 bp72 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-U3KQS1 -
PTPN6-019ENST00000542848656 bp58 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-F5H4Z1 -
PTPN6-013ENST00000536013602 bp56 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-F5H1V7 -
PTPN6-016ENST00000535462543 bp60 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-F5GXD4 -
PTPN6-004ENST00000539029705 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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PTPN6-005ENST00000537533673 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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PTPN6-007ENST00000542277664 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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PTPN6-011ENST00000540740592 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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PTPN6-010ENST00000543120564 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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PTPN6-025ENST00000534900538 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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PTPN6-003ENST000004162152412 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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PTPN6-002ENST000005437442043 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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PTPN6-022ENST00000539365907 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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PTPN6-006ENST00000542761795 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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PTPN6-024ENST00000538318759 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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PTPN6-015ENST00000536521513 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Gene-based displays