Description

tetraspanin 11 [Source:HGNC Symbol;Acc:HGNC:30795]

Location
INSDC coordinates

chromosome:GRCh38:CM000674.2:30926428:30996599:1

About this gene

This gene has 4 transcripts (splice variants), 50 orthologues, 12 paralogues, is a member of 2 Ensembl protein families and is associated with 51 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
TSPAN11-002ENST000002611775505253aaENSP00000261177
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS31765A1L157 NM_001080509
NP_001073978
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

TSPAN11-001ENST000005460761058253aaENSP00000437403
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS31765A1L157 -TSL:2

Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

TSPAN11-003ENST00000545802164941aaENSP00000443890
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F5H195 -TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
TSPAN11-004ENST00000535215988182aaENSP00000445503
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F5H2P0 -TSL:2

Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).

Gene-based displays