Description

glycine receptor, alpha 2 [Source:HGNC Symbol;Acc:HGNC:4327]

Synonyms

GLR

Location
INSDC coordinates

chromosome:GRCh38:CM000685.2:14529298:14731812:1

About this gene

This gene has 4 transcripts (splice variants), 70 orthologues, 13 paralogues, is a member of 1 Ensembl protein family and is associated with 106 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
GLRA2-001ENST000002180753216452aaENSP00000218075
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS14160P23416 NM_001118885
NM_002063
NP_001112357
NP_002054
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P3

PRINCIPAL3 - APPRIS candidate principal isoform (earliest CCDS).

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

GLRA2-201ENST000004434373182363aaENSP00000387756
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS55371P23416 NM_001171942
NP_001165413
TSL:2

Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
GLRA2-003ENST000003550201730452aaENSP00000347123
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS48085P23416 NM_001118886
NP_001112358
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT1

ALTERNATIVE1 - APPRIS candidate principal isoform that is conserved in at least three tested non-primate species.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

GLRA2-002ENST00000415367659215aaENSP00000391606
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C9JBL4 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

Transcript Support Level 3, when transcripts are supported by a single EST only.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays