Description

WD repeat domain 47 [Source:HGNC Symbol;Acc:HGNC:29141]

Synonyms

KIAA0893

INSDC coordinates

chromosome:GRCh38:CM000663.2:108970214:109042113:1

About this gene

This gene has 9 transcripts (splice variants), 77 orthologues, 5 paralogues, is a member of 2 Ensembl protein families and is associated with 92 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
WDR47-001ENST000003699654240920aaENSP00000358982
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS30787O94967 NM_014969
NP_055784
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI3APPRIS candidate principal isoform (earliest CCDS)
Glossary entry for APPRIS
APPRIS website
WDR47-002ENST000003699624199919aaENSP00000358979
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS44187O94967 NM_001142551
NP_001136023
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT1APPRIS candidate principal isoform that is conserved in at least three tested non-primate species
Glossary entry for APPRIS
APPRIS website
WDR47-004ENST000004007944134927aaENSP00000383599
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS44186O94967 NM_001142550
NP_001136022
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
WDR47-201ENST000003576724144893aaENSP00000350301
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A0A0MRE6 -TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
WDR47-003ENST000003610544115891aaENSP00000354339
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-O94967 -TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
WDR47-006ENST0000052907458693aaENSP00000437171
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9PNF6 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

WDR47-008ENST00000528747580106aaENSP00000433452
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9PKZ6 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

WDR47-005ENST00000530772556173aaENSP00000434289
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9PR96 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

WDR47-007ENST0000053133746957aaENSP00000434868
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9PN15 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays