Description

chloride channel, voltage-sensitive 4 [Source:HGNC Symbol;Acc:HGNC:2022]

Synonyms

ClC-4, CLC4

Location
INSDC coordinates

chromosome:GRCh38:CM000685.2:10156945:10237660:1

About this gene

This gene has 4 transcripts (splice variants), 66 orthologues, 8 paralogues, is a member of 1 Ensembl protein family and is associated with 1 phenotype.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
CLCN4-001ENST000003808336750760aaENSP00000370213
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS14137P51793 NM_001830
NP_001821
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
CLCN4-201ENST000004210856534666aaENSP00000405754
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS59159P51793 NM_001256944
NP_001243873
TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
CLCN4-003ENST000003808292418729aaENSP00000370209
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G3XAG5 -TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
CLCN4-002ENST00000454850487152aaENSP00000403064
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9PFB5 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays