Description

LIM domain only 3 (rhombotin-like 2) [Source:HGNC Symbol;Acc:HGNC:6643]

Synonyms

DAT1, RBTNL2, Rhom-3

Location
INSDC coordinates

chromosome:GRCh38:CM000674.2:16548373:16610594:1

Transcripts

This gene has 35 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
LMO3-201ENST000002611693810 bp156 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS58211B4DGL5 F5GYZ6 F5GZR3
F5H2N9 F5H3S4 F5H4K9
F5H4T0 F6TDU8 Q8TAP4
NM_001243611
NP_001230540
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
LMO3-014ENST000003201223759 bp145 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS8678F5GYZ6 F5GZR3 F5H2N9
F5H3S4 F5H4K9 F5H4T0
F6TDU8 Q8TAP4
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
LMO3-202ENST000003546623574 bp145 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS8678F5GYZ6 F5GZR3 F5H2N9
F5H3S4 F5H4K9 F5H4T0
F6TDU8 Q8TAP4
NM_001001395
NP_001001395
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
LMO3-003ENST000004414393515 bp145 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS8678F5GYZ6 F5GZR3 F5H2N9
F5H3S4 F5H4K9 F5H4T0
F6TDU8 Q8TAP4
NM_001243609
NP_001230538
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
LMO3-203ENST000005412953498 bp163 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS58212F5GYZ6 F5GZR3 F5H2N9
F5H3S4 F5H4K9 F5H4T0
F6TDU8 Q8TAP4
NM_001243612
NP_001230541
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
LMO3-010ENST000004476093365 bp145 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS8678F5GYZ6 F5GZR3 F5H2N9
F5H3S4 F5H4K9 F5H4T0
F6TDU8 Q8TAP4
NM_001243610
NP_001230539
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
LMO3-011ENST000005373041685 bp145 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS8678F5GYZ6 F5GZR3 F5H2N9
F5H3S4 F5H4K9 F5H4T0
F6TDU8 Q8TAP4
NM_018640
NP_061110
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
LMO3-001ENST000005408481574 bp145 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS8678F5GYZ6 F5GZR3 F5H2N9
F5H3S4 F5H4K9 F5H4T0
F6TDU8 Q8TAP4
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
LMO3-013ENST000005355351488 bp145 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS8678F5GYZ6 F5GZR3 F5H2N9
F5H3S4 F5H4K9 F5H4T0
F6TDU8 Q8TAP4
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
LMO3-020ENST000005349461016 bp145 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS8678F5GYZ6 F5GZR3 F5H2N9
F5H3S4 F5H4K9 F5H4T0
F6TDU8 Q8TAP4
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
LMO3-007ENST00000540445906 bp167 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS58210Q8TAP4 NM_001243613
NP_001230542
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
LMO3-016ENST00000541846573 bp145 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS8678F5GYZ6 F5GZR3 F5H2N9
F5H3S4 F5H4K9 F5H4T0
F6TDU8 Q8TAP4
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
LMO3-204ENST000006162473227 bp125 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
LMO3-030ENST00000538020622 bp58 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F5H4K9 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
LMO3-021ENST00000546279590 bp110 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F5GYZ6 F5GZR3 F5H2N9
F5H4K9 F5H4T0 F6TDU8
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
LMO3-022ENST00000538051579 bp97 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F5GZR3 F5H2N9 F5H4K9
F5H4T0 F6TDU8
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
LMO3-019ENST00000540590565 bp84 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F5H4K9 F5H4T0 F6TDU8
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
LMO3-031ENST00000539534543 bp118 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F5GYZ6 F5GZR3 F5H2N9
F5H3S4 F5H4K9 F5H4T0
F6TDU8
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
LMO3-029ENST00000545436530 bp88 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F5GZR3 F5H4K9 F5H4T0
F6TDU8
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
LMO3-024ENST00000537757516 bp118 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F5GYZ6 F5GZR3 F5H2N9
F5H3S4 F5H4K9 F5H4T0
F6TDU8
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
LMO3-025ENST00000546281496 bp118 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F5GYZ6 F5GZR3 F5H2N9
F5H3S4 F5H4K9 F5H4T0
F6TDU8
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
LMO3-004ENST000003962053534 bp69 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-F5H4K9 F6TDU8 -
LMO3-012ENST000004537272403 bp60 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-Q05D86 -
LMO3-006ENST000005415891499 bp60 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-Q05D86 -
LMO3-009ENST000005417641489 bp92 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-C9JE61 F5H4K9 F5H655
-
LMO3-002ENST00000424192983 bp70 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-C9JE61 F5H4K9 -
LMO3-027ENST00000536172587 bp60 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-Q05D86 -
LMO3-028ENST00000539232580 bp60 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-Q05D86 -
LMO3-005ENST00000544754555 bp69 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-F5H4K9 F6TDU8 -
LMO3-018ENST00000537568594 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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LMO3-023ENST00000536509550 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
LMO3-017ENST00000332914549 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
LMO3-026ENST00000544276460 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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LMO3-008ENST000005437213626 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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LMO3-015ENST000004396001044 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Gene-based displays