Description

catenin (cadherin-associated protein), alpha 1, 102kDa [Source:HGNC Symbol;Acc:HGNC:2509]

Synonyms

CAP102

INSDC coordinates

chromosome:GRCh38:CM000667.2:138610967:138935034:1

Transcripts



This gene has 43 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
CTNNA1-001ENST000003027633756906 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS34243B4DKT9 B4E2G8 CTNNA1-001
E5RFG3 E5RFK9 E5RFM3
E5RFM5 E5RG03 E5RGD2
E5RGG4 E5RGS1 E5RGU3
E5RGY6 E5RHJ5 E5RHR7
E5RHV7 E5RHY5 E5RIB1
E5RIE0 E5RJ41 E5RJ43
E5RJC9 E5RJL0 E5RJP7
F8W845 P35221
NM_001290309
NM_001290310
NM_001903
NP_001277238
NP_001277239
NP_001894
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform [01-09-2014]
Glossary entry for APPRIS
APPRIS website
CTNNA1-201ENST000005403872684536 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS75315CTNNA1-201 E5RFG3 E5RFK9
E5RFM5 E5RGD2 E5RGG4
E5RGS1 E5RGU3 E5RHJ5
E5RHR7 E5RHY5 E5RJ43
E5RJC9 E5RJP7 P35221
NM_001290312
NP_001277241
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
CTNNA1-006ENST000005188253536841 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-CTNNA1-006 E5RFG3 E5RFK9
E5RFM3 E5RFM5 E5RG03
E5RGD2 E5RGG4 E5RGS1
E5RGU3 E5RGY6 E5RHJ5
E5RHR7 E5RHV7 E5RHY5
E5RIB1 E5RIE0 E5RJ41
E5RJ43 E5RJC9 E5RJL0
E5RJP7 G3XAM7
NM_001290307
NP_001277236
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
CTNNA1-023ENST00000522013874105 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-CTNNA1-023 E5RFG3 E5RFK9
E5RGG4 E5RGS1 E5RGU3
E5RHJ5 E5RHR7 E5RHY5
E5RJ43 E5RJC9
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

CTNNA1-008ENST00000520339868101 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-CTNNA1-008 E5RFM3 E5RJL0
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

CTNNA1-010ENST00000519113859139 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-CTNNA1-010 E5RFM3 E5RGY6
E5RHV7 E5RIE0 E5RJL0
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

CTNNA1-011ENST00000520158719215 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-CTNNA1-011 E5RFM3 E5RG03
E5RGY6 E5RHV7 E5RIB1
E5RIE0 E5RJL0
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

CTNNA1-024ENST0000052026071032 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-CTNNA1-024 E5RHY5 E5RJC9
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

CTNNA1-015ENST00000517980696118 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-CTNNA1-015 E5RFM3 E5RIE0
E5RJL0
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

CTNNA1-025ENST00000523685694128 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-CTNNA1-025 E5RFG3 E5RFK9
E5RFM5 E5RGD2 E5RGG4
E5RGS1 E5RGU3 E5RHJ5
E5RHR7 E5RHY5 E5RJ43
E5RJC9 E5RJP7
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

CTNNA1-017ENST00000522227642123 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-CTNNA1-017 E5RFM3 E5RHV7
E5RIE0 E5RJL0
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

CTNNA1-031ENST0000051963458950 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-CTNNA1-031 E5RGG4 E5RGS1
E5RHR7 E5RHY5 E5RJ43
E5RJC9
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

CTNNA1-027ENST00000517533579119 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-CTNNA1-027 E5RFG3 E5RFK9
E5RFM5 E5RGG4 E5RGS1
E5RGU3 E5RHJ5 E5RHR7
E5RHY5 E5RJ43 E5RJC9
E5RJP7
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

CTNNA1-030ENST00000523298577110 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-CTNNA1-030 E5RFG3 E5RFK9
E5RFM5 E5RGG4 E5RGS1
E5RGU3 E5RHJ5 E5RHR7
E5RHY5 E5RJ43 E5RJC9
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

CTNNA1-014ENST00000518910572161 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-CTNNA1-014 E5RJ41 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

CTNNA1-034ENST0000052164056841 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-CTNNA1-034 E5RGG4 E5RHR7
E5RHY5 E5RJ43 E5RJC9
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

CTNNA1-036ENST0000052168356571 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-CTNNA1-036 E5RGG4 E5RGS1
E5RGU3 E5RHR7 E5RHY5
E5RJ43 E5RJC9
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

CTNNA1-028ENST0000051911656292 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-CTNNA1-028 E5RFG3 E5RGG4
E5RGS1 E5RGU3 E5RHJ5
E5RHR7 E5RHY5 E5RJ43
E5RJC9
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

CTNNA1-035ENST0000051976856020 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-CTNNA1-035 E5RJC9 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

CTNNA1-026ENST0000052086555737 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-CTNNA1-026 E5RHR7 E5RHY5
E5RJC9
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

CTNNA1-029ENST0000051765655439 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-CTNNA1-029 E5RGG4 E5RHR7
E5RHY5 E5RJC9
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

CTNNA1-007ENST00000523912545156 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-CTNNA1-007 E5RFM3 E5RG03
E5RGY6 E5RHV7 E5RIE0
E5RJL0
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

CTNNA1-038ENST0000051838148775 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-CTNNA1-038 E5RGG4 E5RGS1
E5RGU3 E5RHJ5 E5RHR7
E5RHY5 E5RJ43 E5RJC9
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

CTNNA1-040ENST00000520520484136 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-CTNNA1-040 E5RGY7 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

CTNNA1-016ENST0000052412748394 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-CTNNA1-016 E5RFM3 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

CTNNA1-037ENST0000052052239050 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-CTNNA1-037 E5RGG4 E5RGS1
E5RHR7 E5RHY5 E5RJ43
E5RJC9
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

CTNNA1-003ENST00000521724274137 aa
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-CTNNA1-003 E5RJZ2 -TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

CTNNA1-012ENST0000051930986955 aa
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-CTNNA1-012 E5RIT8 -TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

CTNNA1-043ENST0000052205257964 aa
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-CTNNA1-043 E5RGG4 E5RGS1
E5RHR7 E5RHY5 E5RJ43
E5RJC9
-TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

CTNNA1-044ENST0000052136854422 aa
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-CTNNA1-044 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

CTNNA1-019ENST00000523275536129 aa
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-CTNNA1-019 H0YBB8 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

CTNNA1-021ENST00000520400589No protein
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
-CTNNA1-021 -TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

CTNNA1-018ENST00000518585568No protein
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
-CTNNA1-018 -TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

CTNNA1-032ENST00000524292557No protein
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
-CTNNA1-032 -TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

CTNNA1-033ENST00000518263548No protein
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
-CTNNA1-033 -TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

CTNNA1-009ENST00000521941224No protein
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
-CTNNA1-009 -TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

CTNNA1-005ENST000005227922044No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
-CTNNA1-005 -TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

CTNNA1-039ENST00000521387871No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
-CTNNA1-039 -TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

CTNNA1-046ENST00000522730750No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
-CTNNA1-046 -TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

CTNNA1-042ENST00000517904661No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
-CTNNA1-042 -TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

CTNNA1-045ENST00000518919498No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
-CTNNA1-045 -TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

CTNNA1-020ENST00000517534416No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
-CTNNA1-020 -TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

CTNNA1-041ENST00000519489358No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
-CTNNA1-041 -TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays