Description

solute carrier family 45, member 4 [Source:HGNC Symbol;Acc:HGNC:29196]

Synonyms

KIAA1126

INSDC coordinates

chromosome:GRCh38:CM000670.2:141207166:141308305:1

About this gene

This gene has 6 transcripts (splice variants), 71 orthologues, 3 paralogues, is a member of 1 Ensembl protein family and is associated with 150 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
SLC45A4-002ENST000005190677483717aaENSP00000429059
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS69550Q5BKX6 NM_001286648
NP_001273577
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SLC45A4-001ENST000000240613546798aaENSP00000024061
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS34948Q5BKX6 NM_001080431
NP_001073900
TSL:2

Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

SLC45A4-003ENST000005178783470808aaENSP00000428137
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS75795E7EV90 NM_001286646
NP_001273575
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SLC45A4-005ENST0000052013783596aaENSP00000429033
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E5RJM7 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

Transcript Support Level 3, when transcripts are supported by a single EST only.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

SLC45A4-004ENST00000519986542102aaENSP00000429974
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E5RGN5 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

Transcript Support Level 3, when transcripts are supported by a single EST only.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

SLC45A4-006ENST00000521804726No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---TSL:3

Transcript Support Level 3, when transcripts are supported by a single EST only.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays