Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: lsm6 ENSGACG00000017223

.

Description

LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-040625-50]

Location

Primary_assembly IX: 15,367,658-15,384,502 forward strand.

GAculeatus_UGA_version5:CM029290.1

About this gene

This gene has 4 transcripts (splice variants), 212 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGACT00000076494.1	lsm6-203	676	153aa	ENSGACP00000053511.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAQ4QTX7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSGACT00000068200.1	lsm6-202	1593	144aa	ENSGACP00000045903.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAQ4Q6I3	-
ENSGACT00000022788.2	lsm6-204	604	127aa	ENSGACP00000022745.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3PYQ5	-
ENSGACT00000043999.1	lsm6-201	561	94aa	ENSGACP00000038483.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAQ4PJ53	-

.

Summary

.

.