Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: UPF1 ENSELUG00000020917

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Description

UPF1 RNA helicase and ATPase [Ensembl NN prediction with score 100%]

Location

Primary_assembly 3: 27,632,798-27,643,930 forward strand.

fEsoLuc1.pri:CM021595.1

About this gene

This gene has 6 transcripts (splice variants), 190 orthologues and 12 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSELUT00000042020.3	UPF1-204	3390	1128aa	ENSELUP00000040396.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3P9AGX4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSELUT00000096704.1	UPF1-202	4092	1113aa	ENSELUP00000084064.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSELUT00000032648.3	UPF1-201	3575	1113aa	ENSELUP00000040410.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3P9AI77	-
ENSELUT00000093410.1	UPF1-205	2295	763aa	ENSELUP00000090323.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSELUT00000108016.1	UPF1-203	942	313aa	ENSELUP00000083461.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSELUT00000101693.1	UPF1-206	873	289aa	ENSELUP00000088468.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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