Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: SMG5 ENSELUG00000012585

.

Description

SMG5 nonsense mediated mRNA decay factor [Ensembl NN prediction with score 100%]

Location

Primary_assembly 20: 13,996,082-14,016,760 forward strand.

fEsoLuc1.pri:CM021612.1

About this gene

This gene has 7 transcripts (splice variants), 210 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSELUT00000044528.2	SMG5-201	4539	1112aa	ENSELUP00000070135.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6Q2YX15	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSELUT00000020565.3	SMG5-202	4449	1082aa	ENSELUP00000012311.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3P8Y6J1	-
ENSELUT00000066248.2	SMG5-204	4067	1021aa	ENSELUP00000074493.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6Q2Z9E6	-
ENSELUT00000059254.2	SMG5-205	4049	1015aa	ENSELUP00000045059.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6Q2WTP3	-
ENSELUT00000044794.2	SMG5-203	4046	1014aa	ENSELUP00000070978.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6Q2YZG4	-
ENSELUT00000048672.2	SMG5-206	3995	997aa	ENSELUP00000059953.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6Q2Y226	-
ENSELUT00000020522.3	SMG5-207	3974	990aa	ENSELUP00000034091.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3P8ZZV5	-

.

Summary

.

.