Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SMARCAL1 ENSELUG00000010440

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Description

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1 [Ensembl NN prediction with score 99.96%]

Location

Primary_assembly 20: 43,999,585-44,022,504 reverse strand.

fEsoLuc1.pri:CM021612.1

About this gene

This gene has 5 transcripts (splice variants), 192 orthologues and 38 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSELUT00000002999.3	SMARCAL1-203	3967	1073aa	ENSELUP00000009921.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3P8XZQ9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSELUT00000003021.3	SMARCAL1-202	4356	1051aa	ENSELUP00000009917.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3P8XZT2	-
ENSELUT00000097890.1	SMARCAL1-201	3797	931aa	ENSELUP00000093142.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSELUT00000077176.2	SMARCAL1-204	2565	854aa	ENSELUP00000062824.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6Q2YA40	-
ENSELUT00000079743.2	SMARCAL1-205	2370	789aa	ENSELUP00000072113.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6Q2Z2M5	-

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Summary

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