Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SF1 ENSECAG00000024544

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Description

splicing factor 1 [Source:VGNC Symbol;Acc:VGNC:22885]

Location

Primary_assembly 12: 28,619,104-28,632,850 reverse strand.

EquCab3.0:CM009159.1

About this gene

This gene has 5 transcripts (splice variants), 175 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000026475.4	SF1-201	3361	711aa	ENSECAP00000022087.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6QXS3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000077991.2	SF1-202	3532	639aa	ENSECAP00000055043.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F5Q2B0	-
ENSECAT00000077649.2	SF1-203	3062	638aa	ENSECAP00000048025.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F5PHQ5	-
ENSECAT00000071864.2	SF1-204	2768	610aa	ENSECAP00000047530.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F5PGF1	-
ENSECAT00000146217.1	SF1-205	804	141aa	ENSECAP00000069195.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0RZD1	-

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Summary

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