Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: PUM1 ENSECAG00000021369

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Description

pumilio RNA binding family member 1 [Source:VGNC Symbol;Acc:VGNC:22044]

Location

Primary_assembly 2: 25,455,716-25,627,362 forward strand.

EquCab3.0:CM009149.1

About this gene

This gene has 9 transcripts (splice variants), 220 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000055596.3	PUM1-204	6355	1303aa	ENSECAP00000028219.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2H3K7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000130993.1	PUM1-203	5407	1118aa	ENSECAP00000071961.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0S754	-
ENSECAT00000136426.1	PUM1-209	4332	1188aa	ENSECAP00000058189.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0R6V3	-
ENSECAT00000118686.1	PUM1-201	4199	1244aa	ENSECAP00000059402.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0R981	-
ENSECAT00000022900.4	PUM1-208	3946	1167aa	ENSECAP00000018948.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6Q912	-
ENSECAT00000072080.2	PUM1-205	3938	1140aa	ENSECAP00000054172.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F5Q2J3	-
ENSECAT00000126327.1	PUM1-207	3807	1110aa	ENSECAP00000082557.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0T5X4	-
ENSECAT00000072164.2	PUM1-202	3807	1090aa	ENSECAP00000051870.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F5PVQ0	-
ENSECAT00000040820.2	PUM1-206	3644	1042aa	ENSECAP00000031375.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2HB88	-

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Summary

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