Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: PRPF18 ENSECAG00000006997

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Description

pre-mRNA processing factor 18 [Source:VGNC Symbol;Acc:VGNC:111922]

Location

Primary_assembly 29: 22,256,018-22,349,830 reverse strand.

EquCab3.0:CM009176.1

About this gene

This gene has 8 transcripts (splice variants) and 209 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000124737.1	PRPF18-202	3572	369aa	ENSECAP00000057033.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0QZB0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000095352.1	PRPF18-206	8300	328aa	ENSECAP00000064991.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0RT16	-
ENSECAT00000031780.3	PRPF18-203	3518	351aa	ENSECAP00000024089.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2GUS4	-
ENSECAT00000007036.4	PRPF18-204	3503	346aa	ENSECAP00000005083.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7DYU0	-
ENSECAT00000128528.1	PRPF18-205	3419	318aa	ENSECAP00000060165.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0RET3	-
ENSECAT00000117181.1	PRPF18-201	3412	316aa	ENSECAP00000056158.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0R148	-
ENSECAT00000038650.2	PRPF18-207	2545	323aa	ENSECAP00000035303.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2HMR9	-
ENSECAT00000138526.1	PRPF18-208	1132	334aa	ENSECAP00000085719.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0TGK2	-

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Summary

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