Transcript: FBtr0343298 Lpt-RB

Description

Lost PHDs of trr

Gene Synonyms

Lpt

Location

About this transcript

This transcript has 9 exons, is annotated with 51 domains and features and maps to 30 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0072134	Lpt-RA	4608	1482aa	FBpp0072043	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q961F0 Q9W1H0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
FBtr0343298	Lpt-RB	4596	1478aa	FBpp0309963	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LGG6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 4,596 bps, Translation length: 1,478 residues

Version

FBtr0343298

Type

Protein coding

Annotation Method

Feature imported from FlyBase.