Transcript: FBtr0083746 CG5555-RA

Gene Synonyms

CG5555

Location

About this transcript

This transcript has 5 exons, is annotated with 22 domains and features and maps to 30 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0332165	CG5555-RB	1968	558aa	FBpp0304474	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KHR2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
FBtr0083746	CG5555-RA	1976	555aa	FBpp0083160	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VDZ1	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,976 bps, Translation length: 555 residues

Version

FBtr0083746

Type

Protein coding

Annotation Method

Feature imported from FlyBase.