Transcript: FBtr0080096 Trim9-RA

Description

Tripartite motif containing 9

Gene Synonyms

Trim9

Location

About this transcript

This transcript has 9 exons, is annotated with 36 domains and features and maps to 45 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0304114	Trim9-RB	3816	740aa	FBpp0293057	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MRI4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
FBtr0080096	Trim9-RA	3103	729aa	FBpp0079685	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q86P21	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 3,103 bps, Translation length: 729 residues

Version

FBtr0080096

Type

Protein coding

Annotation Method

Feature imported from FlyBase.