Transcript: ENSDART00000149449.2 pabpc1a-205

Description

poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]

Gene Synonyms

pabpc1, wu:fb16a02, wu:fc31e01, wu:fi19b08, wu:fj12d09, wu:fj61f06, zgc:109879

Location

Chromosome 16: 54,829,735-54,839,720 forward strand.

About this transcript

This transcript has 5 exons, is associated with 21 variant alleles and maps to 33 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000017219.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000024729.9	pabpc1a-201	2554	634aa	ENSDARP00000021064.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QB54	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000148392.2	pabpc1a-202	2033	634aa	ENSDARP00000124828.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QB54	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000149449.2	pabpc1a-205	747	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000149603.3	pabpc1a-206	660	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000149264.2	pabpc1a-204	539	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000149119.2	pabpc1a-203	330	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 747 bps,

Version

ENSDART00000149449.2

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000149449.2 pabpc1a-205

Summary

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Transcript: ENSDART00000149449.2 pabpc1a-205

Summary

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