Transcript: ENSDART00000148369.3 camk2d1-206

Description

calcium/calmodulin-dependent protein kinase (CaM kinase) II delta 1 [Source:NCBI gene;Acc:445208]

Gene Synonyms

camk2db, wu:fc54g06, zgc:101001, zgc:173815

Location

Chromosome 7: 57,795,974-57,864,157 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 11 domains and features, is associated with 1252 variant alleles and maps to 33 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000043010.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000142259.3	camk2d1-204	2886	476aa	ENSDARP00000119349.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DEH3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000166198.2	camk2d1-207	3282	491aa	ENSDARP00000131013.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4ID72 Q6DEH3	-
ENSDART00000056466.8	camk2d1-201	1730	491aa	ENSDARP00000056465.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2U3TVF6	-
ENSDART00000136175.3	camk2d1-202	870	289aa	ENSDARP00000113196.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RAL9	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000148369.3	camk2d1-206	793	264aa	ENSDARP00000118250.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QL80	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000138757.2	camk2d1-203	763	245aa	ENSDARP00000118537.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QLM0	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000145605.2	camk2d1-205	606	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 793 bps, Translation length: 264 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000148369.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000148369.3 camk2d1-206

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Transcript: ENSDART00000148369.3 camk2d1-206

Summary

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