Transcript: ENSDART00000148257.2 casz1-202

Description

castor zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-060130-108]

Gene Synonyms

sb:eu580, wu:fk85f10

Location

About this transcript

This transcript has 17 exons, is annotated with 42 domains and features, is associated with 735 variant alleles and maps to 242 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000148257.2	casz1-202	4933	1644aa	ENSDARP00000117224.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QCI7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000002812.10	casz1-201	4701	1566aa	ENSDARP00000017782.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RB02	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 17, Coding exons: 17, Transcript length: 4,933 bps, Translation length: 1,644 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000148257.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.