Transcript: ENSDART00000148032.2 clasrp-203

Description

CLK4-associating serine/arginine rich protein [Source:ZFIN;Acc:ZDB-GENE-060503-837]

Gene Synonyms

sfrs16, si:dkey-7l12.4, zgc:153344

Location

Chromosome 18: 36,625,490-36,631,294 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 8 domains and features, is associated with 420 variant alleles and maps to 151 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000061742.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000127825.4	clasrp-201	2758	642aa	ENSDARP00000111822.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LUX7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000192905.1	clasrp-204	5314	644aa	ENSDARP00000146846.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q6U9	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000148032.2	clasrp-203	1113	122aa	ENSDARP00000117504.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QZT1	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000134854.2	clasrp-202	1083	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,113 bps, Translation length: 122 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000148032.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000148032.2 clasrp-203

Summary

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Transcript: ENSDART00000148032.2 clasrp-203

Summary

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