Transcript: ENSDART00000147903.3 lrit1a-201

Description

leucine-rich repeat, immunoglobulin-like and transmembrane domains 1a [Source:ZFIN;Acc:ZDB-GENE-040924-5]

Gene Synonyms

lrit1, lrrc21, zgc:112140

Location

About this transcript

This transcript has 4 exons, is annotated with 27 domains and features, is associated with 224 variant alleles and maps to 161 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000147903.3	lrit1a-201	3427	643aa	ENSDARP00000114768.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8A5X5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 3,427 bps, Translation length: 643 residues

Version

ENSDART00000147903.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.