Transcript: ENSDART00000147520.3 lnx1-202

Description

ligand of numb-protein X 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9439]

Gene Synonyms

fj78f06, lnx, si:dkey-12h2.1, wu:fj78f06, zgc:152906

Location

About this transcript

This transcript has 11 exons, is annotated with 38 domains and features, is associated with 791 variant alleles and maps to 315 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000147520.3	lnx1-202	3317	765aa	ENSDARP00000118247.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5RH21	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000143286.2	lnx1-201	492	164aa	ENSDARP00000119355.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5RH22	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 3,317 bps, Translation length: 765 residues

Version

ENSDART00000147520.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.