Transcript: ENSDART00000146960.3 lrba-202

Description

LPS-responsive vesicle trafficking, beach and anchor containing [Source:ZFIN;Acc:ZDB-GENE-090311-19]

Gene Synonyms

si:dkey-257n17.3

Location

About this transcript

This transcript has 34 exons, is annotated with 38 domains and features, is associated with 3694 variant alleles and maps to 110 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000177989.2	lrba-203	11193	2861aa	ENSDARP00000143583.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286Y8V9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000146960.3	lrba-202	5550	1850aa	ENSDARP00000119601.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R6G2	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000142740.3	lrba-201	1145	381aa	ENSDARP00000116531.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8A482	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 34, Coding exons: 34, Transcript length: 5,550 bps, Translation length: 1,850 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000146960.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

not organism-supported [Definitions]