Transcript: ENSDART00000145907.3 gucy2d-202

Description

guanylate cyclase 2D, retinal [Source:ZFIN;Acc:ZDB-GENE-011128-9]

Gene Synonyms

GUCY2d1, RETGC-3, gc3, zat, zatoichi

Location

About this transcript

This transcript has 20 exons, is annotated with 29 domains and features, is associated with 434 variant alleles and maps to 247 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000145907.3	gucy2d-202	4522	1176aa	ENSDARP00000113061.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2BFQ0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000097770.6	gucy2d-201	3892	1137aa	ENSDARP00000088541.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QSL9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 20, Coding exons: 18, Transcript length: 4,522 bps, Translation length: 1,176 residues

Version

ENSDART00000145907.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.