Transcript: ENSDART00000144559.2 cnppd1-202

Description

cyclin Pas1/PHO80 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6808]

Gene Synonyms

c2orf24, wu:fa05h07, zgc:55857

Location

About this transcript

This transcript has 4 exons, is associated with 53 variant alleles and maps to 80 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000037036.4	cnppd1-201	2406	427aa	ENSDARP00000036344.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8A448	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000188295.1	cnppd1-203	4856	460aa	ENSDARP00000152979.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QKN6	-
ENSDART00000144559.2	cnppd1-202	666	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 666 bps,

Version

ENSDART00000144559.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.