Transcript: ENSDART00000143716.2 lipg-203

Description

lipase, endothelial [Source:ZFIN;Acc:ZDB-GENE-040426-699]

Gene Synonyms

zgc:55345

Location

About this transcript

This transcript has 5 exons, is annotated with 20 domains and features, is associated with 297 variant alleles and maps to 155 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000098850.5	lipg-201	2277	500aa	ENSDARP00000089620.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QET5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000143716.2	lipg-203	827	245aa	ENSDARP00000119561.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QEI6	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000132644.2	lipg-202	1078	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000143917.2	lipg-204	513	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 827 bps, Translation length: 245 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000143716.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.