Transcript: ENSDART00000143668.2 hlx1-202

Description

H2.0-like homeo box 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5304]

Gene Synonyms

fa28a07, wu:fa28a07, zgc:76923

Location

About this transcript

This transcript has 3 exons, is annotated with 20 domains and features, is associated with 159 variant alleles and maps to 146 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000131806.3	hlx1-201	1474	356aa	ENSDARP00000116160.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8JMG3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000143668.2	hlx1-202	954	280aa	ENSDARP00000119935.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8JMG4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 954 bps, Translation length: 280 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000143668.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.