Transcript: ENSDART00000142819.2 tmem110l-202

Description

transmembrane protein 110, like [Source:ZFIN;Acc:ZDB-GENE-040426-912]

Gene Synonyms

zgc:56123

Location

About this transcript

This transcript has 4 exons, is annotated with 4 domains and features, is associated with 236 variant alleles and maps to 139 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000066936.6	tmem110l-201	1701	278aa	ENSDARP00000066935.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5RHF0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000142819.2	tmem110l-202	529	117aa	ENSDARP00000122348.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5RHF2	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000146792.2	tmem110l-203	517	125aa	ENSDARP00000121465.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5RHF1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 529 bps, Translation length: 117 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000142819.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.