Transcript: ENSDART00000141183.2 msi2a-205

Description

musashi RNA-binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-030826-25]

Gene Synonyms

cb746, fi47b09, msi2, wu:fb02d08, wu:fi32d12, wu:fi47b09

Location

Chromosome 10: 37,503,856-37,729,160 forward strand.

About this transcript

This transcript has 6 exons, is associated with 3001 variant alleles and maps to 21 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000033901.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000132096.3	msi2a-202	2259	388aa	ENSDARP00000123512.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZW10	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000099473.3	msi2a-201	1169	388aa	ENSDARP00000090247.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZW10	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000135642.3	msi2a-204	521	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000141183.2	msi2a-205	493	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000134104.3	msi2a-203	406	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 493 bps,

Version

ENSDART00000141183.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000141183.2 msi2a-205

Summary

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Transcript: ENSDART00000141183.2 msi2a-205

Summary

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