Transcript: ENSDART00000140203.2 ftr04-202

Description

finTRIM family, member 4 [Source:ZFIN;Acc:ZDB-GENE-070912-226]

Gene Synonyms

si:ch211-235o23.5

Location

Chromosome 2: 42,260,021-42,261,298 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 17 domains and features, is associated with 216 variant alleles and maps to 126 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000093932.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000140203.2	ftr04-202	874	291aa	ENSDARP00000121402.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0S722	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000193349.1	ftr04-204	3609	247aa	ENSDARP00000144656.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8PXU8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000124702.3	ftr04-201	807	268aa	ENSDARP00000107072.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R925	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000184079.1	ftr04-203	240	79aa	ENSDARP00000145133.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8PYU1	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 874 bps, Translation length: 291 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000140203.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000140203.2 ftr04-202

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Transcript: ENSDART00000140203.2 ftr04-202

Summary

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