Transcript: ENSDART00000139776.2 chn2-202

Description

chimerin 2 [Source:ZFIN;Acc:ZDB-GENE-091020-5]

Location

About this transcript

This transcript has 12 exons, is annotated with 26 domains and features, is associated with 1940 variant alleles and maps to 105 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000014769.9	chn2-201	1905	466aa	ENSDARP00000027417.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F3K5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000139776.2	chn2-202	1352	450aa	ENSDARP00000122731.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QT22	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000146974.2	chn2-204	701	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000145452.2	chn2-203	611	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 1,352 bps, Translation length: 450 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000139776.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.