Transcript: ENSDART00000138686.2 fam184a-202

Description

family with sequence similarity 184 member A [Source:ZFIN;Acc:ZDB-GENE-041014-214]

Gene Synonyms

si:dkey-238k23.1

Location

Chromosome 20: 41,640,687-41,799,355 forward strand.

About this transcript

This transcript has 17 exons, is annotated with 27 domains and features, is associated with 1782 variant alleles and maps to 165 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000014081.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000135715.4	fam184a-201	4446	1145aa	ENSDARP00000122466.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5SPS1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000186247.1	fam184a-204	4702	552aa	ENSDARP00000145652.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8PX74	-
ENSDART00000138686.2	fam184a-202	3111	1036aa	ENSDARP00000116098.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5SPS2	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000184235.1	fam184a-203	1053	350aa	ENSDARP00000148388.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8RM27	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000186393.1	fam184a-205	792	263aa	ENSDARP00000154893.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QI95	-

Summary

Statistics

Exons: 17, Coding exons: 17, Transcript length: 3,111 bps, Translation length: 1,036 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000138686.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000138686.2 fam184a-202

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Transcript: ENSDART00000138686.2 fam184a-202

Summary

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