Transcript: ENSDART00000138581.2 chs1-205

Description

chitin synthase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1188]

Gene Synonyms

fb62c02, si:zfos-1762d12.1, wu:fb62c02

Location

Chromosome 13: 285,874-293,250 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 23 domains and features, is associated with 196 variant alleles and maps to 193 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000068515.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000099131.6	chs1-201	4652	1463aa	ENSDARP00000089905.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F1A0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000138581.2	chs1-205	2326	707aa	ENSDARP00000112602.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RBW8	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000134963.2	chs1-203	714	238aa	ENSDARP00000117793.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QYS0	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000135782.2	chs1-204	494	164aa	ENSDARP00000121629.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R5W0	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000131747.2	chs1-202	487	163aa	ENSDARP00000118020.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QC77	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000142160.2	chs1-206	716	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 2,326 bps, Translation length: 707 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000138581.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000138581.2 chs1-205

Summary

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Transcript: ENSDART00000138581.2 chs1-205

Summary

About Us

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