Transcript: ENSDART00000138427.3 rpl10a-203

Description

ribosomal protein L10a [Source:NCBI gene;Acc:323305]

Gene Synonyms

wu:fb94f08, zgc:73082, zgc:86881

Location

About this transcript

This transcript has 5 exons, is associated with 255 variant alleles and maps to 150 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000062983.7	rpl10a-201	746	216aa	ENSDARP00000062982.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6PC69	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000138427.3	rpl10a-203	825	67aa	ENSDARP00000114449.1	Nonsense mediated decay	E9QFD9	-
ENSDART00000136547.2	rpl10a-202	920	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000141110.3	rpl10a-204	910	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 825 bps, Translation length: 67 residues

Version

ENSDART00000138427.3

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.