Transcript: ENSDART00000137065.4 col15a1b-202

Description

collagen, type XV, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-070912-689]

Gene Synonyms

cb491, col15a1, mz98, sb:cb491, si:dkeyp-93c5.1, wu:fb50f05, wu:fc22d09

Location

About this transcript

This transcript has 38 exons, is annotated with 44 domains and features, is associated with 1284 variant alleles and maps to 338 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000088643.6	col15a1b-201	3738	1245aa	ENSDARP00000083076.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QM25	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000137065.4	col15a1b-202	4560	1170aa	ENSDARP00000122740.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QT12	-
ENSDART00000189822.1	col15a1b-203	3513	1170aa	ENSDARP00000153703.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QFF2	-

Summary

Statistics

Exons: 38, Coding exons: 38, Transcript length: 4,560 bps, Translation length: 1,170 residues

Version

ENSDART00000137065.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.