Transcript: ENSDART00000136787.2 aif1l-202

Description

allograft inflammatory factor 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-9646]

Gene Synonyms

aif1, cb10, fa04b11, sb:cb10, wu:fa04b11, wu:fi14f08, zgc:73179

Location

About this transcript

This transcript has 5 exons, is associated with 633 variant alleles and maps to 250 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000009500.8	aif1l-201	2248	148aa	ENSDARP00000021771.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6PBZ5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000139317.2	aif1l-203	765	122aa	ENSDARP00000114112.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2BHD5	-
ENSDART00000136787.2	aif1l-202	783	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 783 bps,

Version

ENSDART00000136787.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.