Transcript: ENSDART00000136047.4 hdac8-203

Description

histone deacetylase 8 [Source:NCBI gene;Acc:406740]

Gene Synonyms

wu:fd19a02, zgc:66196

Location

Chromosome 7: 51,698,520-51,709,721 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 15 domains and features, is associated with 310 variant alleles and maps to 60 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000003021.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000009184.6	hdac8-201	1935	378aa	ENSDARP00000017858.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R9J0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000136047.4	hdac8-203	725	213aa	ENSDARP00000120949.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QAZ7	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000174307.2	hdac8-205	566	62aa	ENSDARP00000143157.1	Nonsense mediated decay	A0A1L1QZN3	-
ENSDART00000174282.2	hdac8-204	528	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000132716.2	hdac8-202	475	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 725 bps, Translation length: 213 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000136047.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000136047.4 hdac8-203

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Transcript: ENSDART00000136047.4 hdac8-203

Summary

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