Transcript: ENSDART00000135393.2 fam53b-203

Description

family with sequence similarity 53 member B [Source:NCBI gene;Acc:406586]

Gene Synonyms

simplet, smp, wu:fo86c04, zgc:55329, zgc:77156

Location

About this transcript

This transcript has 4 exons, is associated with 724 variant alleles and maps to 180 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000008312.8	fam53b-201	1700	379aa	ENSDARP00000020465.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QN48	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000135393.2	fam53b-203	1585	74aa	ENSDARP00000123381.1	Nonsense mediated decay	E9QCA8	-
ENSDART00000134428.2	fam53b-202	542	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 1,585 bps, Translation length: 74 residues

Version

ENSDART00000135393.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.