Transcript: ENSDART00000135373.2 si:dkey-33c12.4-202

Description

si:dkey-33c12.4 [Source:ZFIN;Acc:ZDB-GENE-030131-2527]

Gene Synonyms

fc10f01, si:ch211-243o19.6, wu:fc10f01

Location

Chromosome 13: 9,361,988-9,367,041 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 394 variant alleles and maps to 69 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000057890.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000083362.7	si:dkey-33c12.4-201	2764	631aa	ENSDARP00000077797.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8A599	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000144146.2	si:dkey-33c12.4-205	524	170aa	ENSDARP00000117541.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8A5A0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000138961.3	si:dkey-33c12.4-203	523	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000157540.2	si:dkey-33c12.4-206	422	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000143653.3	si:dkey-33c12.4-204	640	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000135373.2	si:dkey-33c12.4-202	367	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 367 bps,

Version

ENSDART00000135373.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000135373.2 si:dkey-33c12.4-202

Summary

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Transcript: ENSDART00000135373.2 si:dkey-33c12.4-202

Summary

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