Transcript: ENSDART00000134741.2 arhgef10lb-202

Description

Rho guanine nucleotide exchange factor (GEF) 10-like b [Source:ZFIN;Acc:ZDB-GENE-090313-222]

Gene Synonyms

arhgef10l, si:dkey-1c11.5

Location

About this transcript

This transcript has 20 exons, is annotated with 23 domains and features, is associated with 533 variant alleles and maps to 68 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000134741.2	arhgef10lb-202	3114	1037aa	ENSDARP00000121072.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R7Q3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000111966.4	arhgef10lb-201	1698	565aa	ENSDARP00000101793.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FAM0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000140253.2	arhgef10lb-203	867	289aa	ENSDARP00000117005.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QRC0	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 20, Coding exons: 20, Transcript length: 3,114 bps, Translation length: 1,037 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000134741.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.