Transcript: ENSDART00000134619.2 mpp2b-203

Description

membrane protein, palmitoylated 2b (MAGUK p55 subfamily member 2) [Source:ZFIN;Acc:ZDB-GENE-040704-70]

Gene Synonyms

mpp2, zgc:92011

Location

Chromosome 12: 10,200,101-10,220,036 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 12 domains and features, is associated with 600 variant alleles and maps to 121 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000010957.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000126428.4	mpp2b-201	2766	547aa	ENSDARP00000109525.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q9P1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000170078.3	mpp2b-204	1683	547aa	ENSDARP00000135915.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q9P1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000134619.2	mpp2b-203	741	247aa	ENSDARP00000120769.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QB87	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000132515.2	mpp2b-202	523	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 741 bps, Translation length: 247 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000134619.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

not organism-supported [Definitions]

Transcript: ENSDART00000134619.2 mpp2b-203

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000134619.2 mpp2b-203

Summary

About Us

Get help

Our sister sites

Follow us