Transcript: ENSDART00000134435.2 taar19c-201

Description

trace amine associated receptor 19c [Source:ZFIN;Acc:ZDB-GENE-060414-16]

Gene Synonyms

si:ch211-139n6.22, taar54, zTA54

Location

Chromosome 10: 40,781,076-40,782,107 forward strand.

About this transcript

This transcript has 1 exon, is annotated with 23 domains and features, is associated with 260 variant alleles and maps to 116 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000112400.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000191061.1	taar19c-202	1062	353aa	ENSDARP00000150271.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QAB2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000134435.2	taar19c-201	1032	344aa	ENSDARP00000117400.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QNV9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 1, Coding exons: 1, Transcript length: 1,032 bps, Translation length: 344 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000134435.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000134435.2 taar19c-201

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Transcript: ENSDART00000134435.2 taar19c-201

Summary

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