Transcript: ENSDART00000131295.4 nup62l-201

Description

nucleoporin 62 like [Source:ZFIN;Acc:ZDB-GENE-030131-8491]

Gene Synonyms

fb13d02, wu:fb13d02, zgc:172056

Location

About this transcript

This transcript has 13 exons, is annotated with 15 domains and features, is associated with 1134 variant alleles and maps to 212 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000131295.4	nup62l-201	1893	507aa	ENSDARP00000113639.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QIQ3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000143377.3	nup62l-203	878	269aa	ENSDARP00000134308.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IG74	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000136480.4	nup62l-202	775	214aa	ENSDARP00000121166.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QEC4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 13, Coding exons: 12, Transcript length: 1,893 bps, Translation length: 507 residues

Version

ENSDART00000131295.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.