Zebrafish (GRCz11)
Description

LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]

Gene Synonyms

cypher, hm:zehn1639, ldb3, zasp, zehn1639

Location
About this transcript

This transcript has 7 exons, is annotated with 11 domains and features, is associated with 1352 variant alleles and maps to 174 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeUniProt MatchFlags
ENSDART00000078757.5ldb3a-2061791596aaENSDARP00000073218.3
 
Protein coding
Q4ZGL5 Ensembl CanonicalAPPRIS ALT2
ENSDART00000078747.7ldb3a-2054619580aaENSDARP00000073208.4
 
Protein coding
Q4ZGL0 APPRIS ALT2
ENSDART00000178372.2ldb3a-2182507588aaENSDARP00000143524.1
 
Protein coding
F1QGX8 APPRIS ALT2
ENSDART00000078759.4ldb3a-2072191649aaENSDARP00000073220.3
 
Protein coding
F1Q8D1 APPRIS P5
ENSDART00000131870.3ldb3a-2122119649aaENSDARP00000115285.1
 
Protein coding
F1Q8D1 APPRIS P5
ENSDART00000130424.4ldb3a-2091767588aaENSDARP00000109131.2
 
Protein coding
F1QGX8 APPRIS ALT2
ENSDART00000192972.1ldb3a-2201745291aaENSDARP00000157437.1
 
Protein coding
Q4ZGK9 -
ENSDART00000188182.1ldb3a-2191592283aaENSDARP00000150455.1
 
Protein coding
Q4ZGK8 -
ENSDART00000078740.6ldb3a-2041322291aaENSDARP00000073201.4
 
Protein coding
Q4ZGK9 -
ENSDART00000136863.3ldb3a-214925251aaENSDARP00000112724.1
 
Protein coding
F1RCZ3 CDS 3' incomplete
ENSDART00000137220.3ldb3a-215911247aaENSDARP00000116588.1
 
Protein coding
F1R1G8 CDS 3' incomplete
ENSDART00000078721.3ldb3a-203900299aaENSDARP00000073182.1
 
Protein coding
Q4ZGL2 -
ENSDART00000147348.3ldb3a-217880244aaENSDARP00000122379.1
 
Protein coding
F1QT83 CDS 3' incomplete
ENSDART00000139218.3ldb3a-216867242aaENSDARP00000113888.1
 
Protein coding
F1QU51 CDS 3' incomplete
ENSDART00000133065.3ldb3a-213856227aaENSDARP00000119395.1
 
Protein coding
F1R4H2 CDS 3' incomplete
ENSDART00000044719.7ldb3a-201852283aaENSDARP00000044718.5
 
Protein coding
Q4ZGK8 -
ENSDART00000130957.4ldb3a-210791263aaENSDARP00000110561.2
 
Protein coding
F1QW69 CDS 3' incomplete
ENSDART00000078720.7ldb3a-202780159aaENSDARP00000073181.5
 
Protein coding
E7F8D5 -
ENSDART00000130101.4ldb3a-208777199aaENSDARP00000105278.2
 
Protein coding
E9QCI0 CDS 3' incomplete
ENSDART00000131856.3ldb3a-2111516246aaENSDARP00000114505.1
 
Nonsense mediated decay
E9QF27 -
Statistics

Exons: 7, Coding exons: 7, Transcript length: 791 bps, Translation length: 263 residues

Incomplete CDS

CDS 3' incomplete

Version

ENSDART00000130957.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.