Transcript: ENSDART00000128852.3 celsr1b-201

Description

cadherin EGF LAG seven-pass G-type receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050823-4]

Gene Synonyms

celsr5, flamingo 1b, fmi1b

Location

About this transcript

This transcript has 35 exons, is annotated with 168 domains and features, is associated with 33 variant alleles and maps to 305 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000128852.3	celsr1b-201	9761	3006aa	ENSDARP00000106129.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QBS8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000190268.1	celsr1b-202	14090	2972aa	ENSDARP00000145726.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q4B0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 35, Coding exons: 35, Transcript length: 9,761 bps, Translation length: 3,006 residues

Version

ENSDART00000128852.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.