Transcript: ENSDART00000128762.3 dedd1-202

Description

death effector domain-containing 1 [Source:ZFIN;Acc:ZDB-GENE-000616-2]

Location

About this transcript

This transcript has 7 exons, is associated with 485 variant alleles and maps to 166 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000065467.7	dedd1-201	2529	369aa	ENSDARP00000065466.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QIL7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000128762.3	dedd1-202	1742	244aa	ENSDARP00000105333.1	Nonsense mediated decay	Q6DHV2	-
ENSDART00000145839.3	dedd1-204	831	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000139760.3	dedd1-203	795	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 7, Coding exons: 4, Transcript length: 1,742 bps, Translation length: 244 residues

Version

ENSDART00000128762.3

Type

Nonsense mediated decay

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.